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Displaying items by tag: Biotoxins

Marine Institute chemists who specialise in biotoxins have won a significant international sustainability award for their work.

The Biotoxin Chemistry team who work within the Marine Environment and Food Safety Services (MEFSS) section of the Marine Institute were recently awarded the highest level (Green) of My Green Lab (MGL) certification.

MGL is a non-profit organisation and a globally recognised leader in the ‘green lab’ movement. The MGL programme seeks to reduce the environmental impact of laboratories in four key areas — energy, water, waste and chemical use — through a combination of organisational initiatives and behaviour change.

The aim is to empower scientists to make choices that not only benefit their work but also the environment and communities around them.

The Biotoxin Chemistry team are the second laboratory within the Marine Institute to be awarded MGL certification, with the Newport facility also being certified earlier this year.

‘The Biotoxin Chemistry team’s dedication exemplifies the institute’s commitment to environmental responsibility’

As part of the MGL certification process, the Biotoxin Chemistry team enrolled in 2023 International Freezer Challenge and won the Top Small Lab Award (Government Sector).

This year, 1,991 laboratories across 170 different research institutions, representing 27 countries took part in the challenge, resulting in an energy reduction of an estimated 20.7 million kWh over the past year.

The team comprising seven staff made great efforts to incorporate a cold-storage management plan involving clearing out and cleaning fridges and freezers. Their endeavors resulted in multiple units being taken out of use and an estimated energy reduction of 66.75 KWh/day (equivalent to the electricity consumption of six average Irish households).

Joe Silke, director of MEFSS, reaffirmed the Marine Institute’s commitment to sustainability: “The Biotoxin Chemistry team’s dedication exemplifies the institute’s commitment to environmental responsibility by their recent achievement of the highest level of My Green Lab certification.

“This not only showcases our commitment to reducing our laboratory's ecological footprint but also underscores the broader positive impacts that green lab initiatives can have on our working environment, finances, reputation and staff engagement.”

Published in Marine Science

A postgraduate researcher is investigating the biotoxin production potential of Azadinium and related species in Irish waters, particularly in estuaries used for shellfish aquaculture such as Killary Harbour and Bantry Bay.

Stephen McGirr — a PhD candidate at the Institute of Technology Sligo and a Cullen Fellow at the Marine Institute — is studying Azadinium, a planktonic single-celled plant that lives in marine waters around Ireland.

Under certain conditions, Azadinium produces biotoxins which can build up in shellfish that feed on them. If eaten by humans, this can lead to shellfish poisoning.

Understanding more about the biology of this species would help both the shellfish aquaculture industry and protect human health.

“The genus Azadinium was first linked to incidents of shellfish poisoning in the 1990s and both toxic and non-toxic forms of the Azadinium species have since been identified in Irish waters,” McGirr says.

“More knowledge of the biology of the species is needed to support monitoring efforts currently underway to assist the aquaculture industry.”

Ireland’s aquaculture industry employed 1,925 people on 288 aquaculture production units, according to Bord Iascaigh Mhara’s Business of Seafood Report 2018. In 2018 it is estimated that Ireland produced 24,200 tonnes of farmed shellfish valued at €56 million.

“Aquaculture is a valuable industry to our national economy as well as for many of Ireland's coastal communities,” McGirr adds.

“The closure of aquaculture production sites due to biotoxins produced by organisms such as Azadinium impacts the industry and can also be detrimental to local economies.”

Stephen’s research supports the Marine Institute's National Phytoplanton Monitoring Programme, which monitors phytoplankton populations and dynamics around the Irish coastline.

‘Aquaculture is a valuable industry to our national economy as well as for many of Ireland's coastal communities’

McGirr says the Marine Institute’s Cullen Fellowship Programme is giving him the opportunity to learn and develop his skillset, working alongside scientists who are experts in their field, as well as gaining hands-on experience using state-of-the art equipment in the Institute's laboratories.

“I have joined two surveys on the RV Celtic Voyager along the south and western coastline of Ireland to collect both water column and sediment samples for our analyses.

“I have also presented my research at international conferences, including the International Conference on Molluscan Shellfish Safety held in Galway and the International Conference on Harmful Algae, held in Nantes, France.”

McGirr is currently focusing his efforts on translating the product of his research into articles for peer-reviewed scientific journals. His research supervisors are Joe Silke, Marine Institute and Dr Nicolas Touzet, IT Sligo.

The Cullen Fellowship Programme builds marine research capacity and capability by equipping graduates with the skills and expertise in raising awareness about our ocean, as well as Ireland's rich marine biodiversity and ecosystems.

The programme has provided grant aid to the value of €2.06 million supporting 24 PhD and three MSc students over the last five years. The research addresses a number of the 15 research themes identified in the National Marine Research and Innovation Strategy 2017-2021.

This project (Grant-Aid Agreement No CF/15/01) is carried out with the support of the Marine Institute and funded under the Marine Research Programme by the Irish Government.

Published in Marine Science

Sharks in Irish waters

Irish waters are home to 71 species of shark, skates and rays, 58 of which have been studied in detail and listed on the Ireland Red List of Cartilaginous fish. Irish sharks range from small Sleeper sharks, Dogfish and Catsharks, to larger species like Frilled, Mackerel and Cow sharks, all the way to the second largest shark in the world, the Basking shark. 

Irish waters provide a refuge for an array of shark species. Tralee Bay, Co. Kerry provides a habitat for several rare and endangered sharks and their relatives, including the migratory tope shark, angel shark and undulate ray. This area is also the last European refuge for the extremely rare white skate. Through a European Maritime and Fisheries Fund (EMFF) project, Marine Institute scientists have been working with fishermen to assess the distribution, diversity, and monthly relative abundance of skates and rays in Tralee, Brandon and Dingle Bays.

“These areas off the southwest coast of Ireland are important internationally as they hold some of the last remaining refuges for angel shark and white skate,” said Dr Maurice Clarke of the Marine Institute. “This EMFF project has provided data confirming the critically endangered status of some species and provides up-to-date information for the development of fishery measures to eliminate by-catch.” 

Irish waters are also home to the Black Mouthed Catshark, Galeus melastomus, one of Ireland’s smallest shark species which can be found in the deep sea along the continental shelf. In 2018, Irish scientists discovered a very rare shark-nursery 200 nautical miles off the west coast by the Marine Institute’s ROV Holland 1 on a shelf sloping to 750 metres deep. 

There are two ways that sharks are born, either as live young or from egg casings. In the ‘case’ of Black Mouthed Catsharks, the nursery discovered in 2018, was notable by the abundance of egg casings or ‘mermaid’s purses’. Many sharks, rays and skate lay eggs, the cases of which often wash ashore. If you find an egg casing along the seashore, take a photo for Purse Search Ireland, a citizen science project focusing on monitoring the shark, ray and skate species around Ireland.

Another species also found by Irish scientists using the ROV Holland 1 in 2018 was a very rare type of dogfish, the Sail Fin Rough Shark, Oxynotus paradoxus. These sharks are named after their long fins which resemble the trailing sails of a boat, and live in the deep sea in waters up to 750m deep. Like all sharks, skates and rays, they have no bones. Their skeleton is composed of cartilage, much like what our noses and ears are made from! This material is much more flexible and lighter than bone which is perfect for these animals living without the weight of gravity.

Throughout history sharks have been portrayed as the monsters of the sea, a concept that science is continuously debunking. Basking sharks were named in 1765 as Cetorhinus maximus, roughly translated to the ‘big-nosed sea monster’. Basking sharks are filter feeders, often swimming with their mouths agape, they filter plankton from the water.

They are very slow moving and like to bask in the sun in shallow water and are often seen in Irish waters around Spring and early Summer. To help understand the migration of these animals to be better able to understand and conserve these species, the Irish Basking Shark Group have tagged and mapped their travels.

Remarkably, many sharks like the Angel Shark, Squatina squatina have the ability to sense electricity. They do this via small pores in their skin called the ‘Ampullae of Lorenzini’ which are able to detect the tiny electrical impulses of a fish breathing, moving or even its heartbeat from distances of over a kilometre! Angel sharks, often referred to as Monkfish have a distinctively angelic shape, with flattened, large fins appearing like the wings of an angel. They live on the seafloor in the coastal waters of Ireland and much like a cat are nocturnal, primarily active at night.

The intricate complexity of shark adaptations is particularly noticeable in the texture of their skin. Composed of miniscule, perfectly shaped overlapping scales, the skin of shark provides them with protection. Often shark scales have been compared to teeth due to their hard enamel structure. They are strong, but also due to their intricate shape, these scales reduce drag and allow water to glide past them so that the shark can swim more effortlessly and silently. This natural flawless design has been used as inspiration for new neoprene fabric designs to help swimmers glide through the water. Although all sharks have this feature, the Leafscale Gulper Shark, Centrophorus squamosus, found in Ireland are specifically named due to the ornate leaf-shape of their scales.